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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923902.1_cds_XP_016472381.1_64622
CDS Infomation

[gene=LOC107794410] [db_xref=GeneID:107794410] [protein=ATG8-interacting protein 1-like isoform X2] [protein_id=XP_016472381.1] [location=complement(join(22732..22752,23144..23968))] [gbkey=CDS]
Sequence

ATGGCGAATAATGTGGAAGGGGACGAAGCTACTCCTCATAGAAATGAGTGGGAAGTGGTA
ACGCTTACGCAGTCGGTATATGCTGCTGCCCCTGGTCCAAAACAGGTCGGCCTCGTTGAT
GATAATAGTGCAGAGTATGTAGCTGAAACTTCTGATCCAATGTTTATGTCGGGGCACTTT
GTCGTTCCACCAAATCAGCATGAGGATTCAGCATTGCAACCTGATAATGATGAGATACCT
AGTGAGCAGGGTGGAAAAGATGCTTCTCCTGAACTTGTTACTGATAAAGGGGTTAATTCA
GATATAGATGGACAAAGTACAAAAACTAAAGTATTTAGCACGACGGAATTTTCTGGAGAT
CAAATATTTGATAAAAAGGGTAGCATTTTGTCCGCATGTGGTGCAGAATTTGAAGAAGAT
GCAGTCTTGCAGGGCTTCGGTTTGGTGGACAAAGAGCAGAATTTCTTTGATGCTACTACT
TATAGTTCTTTCCATAGCGAAGAACCCATGGGTGGGTCAGCATCAACAGAGGAAAGCAAT
ATTGTTGCAGAACCAGTTGAACCTGTTCACCAGGGTATAGATTCAGGCATATCAAATTGT
CCAAAGGCTAAAGATGAAGATAACTATGATGCAGAAAATCTTCCTTGCCAAGCGTGGTGG
AAAAGGCGGGCTGTTTCACTTATTGCCCATGCAAAAGATGCAAATGCATTCTGGTCCATT
TTCGTTGCCGCAGCTGTTATGGGCCTTGTGGTTATTGGTCAGAGATGGCAGCTAGAAAGG
TGGCAGGTATTGCAAATGAAGTGGCAGTTTGGAGGCAATGATGAGATTCCATGTCATTCA
TTTTGA

Peptide Sequence

PEP ID

XP_016472381.1
PEP Infomation

PREDICTED: ATG8-interacting protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MANNVEGDEATPHRNEWEVVTLTQSVYAAAPGPKQVGLVDDNSAEYVAETSDPMFMSGHF
VVPPNQHEDSALQPDNDEIPSEQGGKDASPELVTDKGVNSDIDGQSTKTKVFSTTEFSGD
QIFDKKGSILSACGAEFEEDAVLQGFGLVDKEQNFFDATTYSSFHSEEPMGGSASTEESN
IVAEPVEPVHQGIDSGISNCPKAKDEDNYDAENLPCQAWWKRRAVSLIAHAKDANAFWSI
FVAAAVMGLVVIGQRWQLERWQVLQMKWQFGGNDEIPCHSF

Transcript Sequence

Gene sequence data has not been registered.